PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069468.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 199aa MW: 22610.2 Da PI: 11.0931

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	69.4	7.4e-22	1	63	34	96
DUF573 34 idafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 ++afy+f+kks++++vsk+ql+eK+rrLKkK+k++ +k+k g++ fsk+h qk++elskkiW XP_028069468.1 1 MNAFYDFIKKSLHIDVSKTQLFEKVRRLKKKYKNNASKSKMGEDRIFSKAHKQKTYELSKKIW 63 79************************************************************* PP
2	DUF573	81.2	1.5e-25	94	165	25	96
DUF573 25 ktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +g++p d++afy+f+kks++++vsk+ql+eK+rrLKkK+k++ +k+k g++ fsk+h qk++elskkiW XP_028069468.1 94 PRGSDPLVDMNAFYDFIKKSLHIDVSKTQLFEKVRRLKKKYKNNASKSKMGEDRIFSKAHKQKTYELSKKIW 165 589999****************************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MNAFYDFIKK SLHIDVSKTQ LFEKVRRLKK KYKNNASKSK MGEDRIFSKA HKQKTYELSK 60 KIWFGGAKSI GVDSAKVNGK AKNNQSQRAI AASPRGSDPL VDMNAFYDFI KKSLHIDVSK 120 TQLFEKVRRL KKKYKNNASK SKMGEDRIFS KAHKQKTYEL SKKIWFGGAK SIGVDSAKVN 180 GKAKNNQSQR AIAASPRGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	3e-13	GeBP family protein