PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069539.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 191aa MW: 21347.2 Da PI: 4.5224

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	74.9	1.2e-23	11	93	3	85
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al lGf +y+e++ + XP_028069539.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCSREEKRTIAPEHVLKALKVLGFGEYIEEVYA 93 6899***************************************************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MEPMDIVGKT KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLISSESNE 60 VCSREEKRTI APEHVLKALK VLGFGEYIEE VYAAYEQHKL ETMDTLKSGK WNNGAEMTEE 120 EALAEQQRMF AEARARMNGG ATTPKQPGPE AIIPKQPQHE AEAKPKPEPE HEAKPEPEPE 180 PEAKLEPTVN S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.4	3e-95	NF-YB family protein