PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069540.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 162aa    MW: 18120.3 Da    PI: 4.514
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB38.52.7e-1218644086
           NF-YB 40 sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86
                     efi +++se+++ c re+++ti+++ +l al  lGf +y+e++ + 
  XP_028069540.1 18 KEFINLISSESNEVCSREEKRTIAPEHVLKALKVLGFGEYIEEVYAA 64
                    69****************************************98654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MEPMDIVGKT KEDASLPKEF INLISSESNE VCSREEKRTI APEHVLKALK VLGFGEYIEE  60
VYAAYEQHKL ETMQDTLKSG KWNNGAEMTE EEALAEQQRM FAEARARMNG GATTPKQPGP  120
EAIIPKQPQH EAEAKPKPEP EHEAKPEPEP EPEAKLEPTV NS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.34e-68NF-YB family protein