PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069603.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 637aa MW: 72854.1 Da PI: 8.4195

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.1e-20	32	125	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r + + +ek+r ++a tr++Cka++ ++ + +k++vt+++++HnHela XP_028069603.1 32 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDrvAEKSRAPKALTRVSCKAQFCIRYDAdageGEKYVVTHFVTDHNHELA 125 9**************9999.666699999*****99877766899999***********9987667689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MVDDAHGNDM VGDVERAILE QKFDSIENGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 60 LWLCSREGQR LPIYLDRVAE KSRAPKALTR VSCKAQFCIR YDADAGEGEK YVVTHFVTDH 120 NHELAEQHCV MYLRSHRSLN SANKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD 180 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VCNDNKLQNL FWADSKLRAN 240 YAKFGDVLIF DSTYKTNAYK KPFVMLASVT SHFRTTIFAC VLLANETIET YTWVLETFME 300 AMGNKAPVSV LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NVVSNVHISG FAHAFKQCMD 360 METDETKFEH GWTTMVEKFG LQTNNWVLET YEKHHIWAKA YMRGHFFAGM KSTQRSECMN 420 AYFNPFLQHK FKLYEFVRHY DRALARIRYN EAGDDAETNN TFSTRAASKD GQQWPQPSID 480 STTTQTARYG ILSSSYNEMC FYASQSTEGF KEAKDACLPM TSWMKELYER NLNDGNGDKG 540 KHSFPRQFGV EDPDVVKTKG NPGWASSNCC RLRKCGNCKC IGHTKRTFPK VRFSRTVGTN 600 SDADTPHITH HEYNAESLPV RCKTGLVDPS TSDIKQR

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MVDDAHGNDM VGDVERAILE QKFDSIENGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  60
LWLCSREGQR LPIYLDRVAE KSRAPKALTR VSCKAQFCIR YDADAGEGEK YVVTHFVTDH  120
NHELAEQHCV MYLRSHRSLN SANKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD  180
LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VCNDNKLQNL FWADSKLRAN  240
YAKFGDVLIF DSTYKTNAYK KPFVMLASVT SHFRTTIFAC VLLANETIET YTWVLETFME  300
AMGNKAPVSV LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NVVSNVHISG FAHAFKQCMD  360
METDETKFEH GWTTMVEKFG LQTNNWVLET YEKHHIWAKA YMRGHFFAGM KSTQRSECMN  420
AYFNPFLQHK FKLYEFVRHY DRALARIRYN EAGDDAETNN TFSTRAASKD GQQWPQPSID  480
STTTQTARYG ILSSSYNEMC FYASQSTEGF KEAKDACLPM TSWMKELYER NLNDGNGDKG  540
KHSFPRQFGV EDPDVVKTKG NPGWASSNCC RLRKCGNCKC IGHTKRTFPK VRFSRTVGTN  600
SDADTPHITH HEYNAESLPV RCKTGLVDPS TSDIKQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-81	FAR1 family protein