PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069625.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 302aa    MW: 33234.1 Da    PI: 10.2053
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.98.4e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_028069625.1  5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGAPKQKWTQ EEEAALKAGV IKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRMQPAP KQDENPMAPS TSVESDEEID DVKRLAVSSG SLQIGVPKRS  120
IIRLDNLIMD ALNNLKEPGG SNKTAIATYI EEQYWAPPNF KRSLSAKLKF LTASGKLIKM  180
KRKYRIATPS TLSDKRRNLS GLLLEGRQRT SPKIDKDDNN ILTKAQVDLE LARMRSMNPQ  240
EAAVAAAQAV AEAEAAIAEA EEAAREAEAA EADAEAAQAF AEAALKTLKG RNINTPRMMV  300
HA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-106MYB_related family protein