PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069761.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 238aa MW: 25412.4 Da PI: 10.8071

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.5	2.4e-34	10	115	3	112
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksa 94 k++ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLl+ ak ai e+ gt++++a ++ ++s +++ +++ XP_028069761.1 10 IKRSATKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETVKWLLERAKLAIFEAIGTGTIPAIAVsVNGS-------LKIPttPPTTTE 97 58999***********************************************************999955521112.......222222222222 PP TCP 95 akskksqksaasalnlak 112 a+ k++++ a+++++ + XP_028069761.1 98 AQAAKKKRKRACTSEFID 115 233444444444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MIEKSKVGKI KRSATKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS DGETVKWLLE 60 RAKLAIFEAI GTGTIPAIAV SVNGSLKIPT TPPTTTEAQA AKKKRKRACT SEFIDVSDSA 120 PAPAPSNFAL VTTMTPQRLL PVWAVAGGGA PPNAFFMIPP PGTAIAGPSN QPQIWSIPAG 180 AMPMFNVSAR PVSNYVSAIS TTTATTTTTT QMLRDFSLEI YDKKELQFMV SSGGDQAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	7e-66	TCP family protein