PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069804.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-other
Protein Properties Length: 111aa    MW: 13159.1 Da    PI: 9.3093
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.73.5e-172583357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t eq+e+Le++++++++ps  +r++L + +    +++ + +kvWFqN R +ek+
  XP_028069804.1 25 KYVRYTGEQVEALERVYAECPKPSSLRRQQLIRDCpilsNIEPKHIKVWFQNCRCREKQ 83
                    6789*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MAMAVAHQHR ESSSDSMNRH LDAEKYVRYT GEQVEALERV YAECPKPSSL RRQQLIRDCP  60
ILSNIEPKHI KVWFQNCRCR EKQQKEASRL QTVNKKMTVM NKLLMEENDR L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.12e-57HD-ZIP family protein