PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069892.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 1098aa MW: 123948 Da PI: 5.3125

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069892.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.3	8e-55	21	138	2	118
CG-1 2 lkekkrwlkn.eeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+ ++rwl++ ei++iL+n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fq XP_028069892.1 21 LEAQHRWLRPfAEICEILQNYKKFRIAPEPANKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQ 115 5679***9569****************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+ywlLeee+++ivlvhy+evk XP_028069892.1 116 RRSYWLLEEERSNIVLVHYREVK 138 ******************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1098 aa Download sequence
MAEPRRYSLG TQQLDIEQIL LEAQHRWLRP FAEICEILQN YKKFRIAPEP ANKPPSGSLF 60 LFDRKVLRYF RKDGHNWRKK KDGKTVKEAH ERLKAGSVDV LHCYYAHGEE NENFQRRSYW 120 LLEEERSNIV LVHYREVKGN RANFSRIKEA EETIHNSQES EEIVPNSEVD SSVSSTFNPY 180 NYQVTSHATD TASLNSAQAS EYEDAESGYN HQASSGFHSF LELQPRVVEK MEDGLSVPYY 240 PVPFSNDYEG KLSAIPGMDF VPLVQGDKGK NSVNADLTFE PQKQLDFSSW KDVVGNSGTG 300 IQSDTMSFNP GQGNELLEQI LTNDFGKSED AGIYPPRQDK WQTSEGDSSH ISKWSMDQKF 360 YPESEYYPTT ELYRGVNAVD LLNSAGPFHA HSAEQNEHHT QSDLQIQSRS ALKPASENNP 420 IIEGKAESYP LKQPLLDSFL REGLKKLDSF DRWMSKELGD VNESHTQSNS GTYWETVETE 480 DGVDDSSIAP QAHLETYMLG PSLSQDQLFS IIDFSPNWAY AGSEIKVLIT GKFLMNQQDV 540 DKCKWSCMFG EVEVPAEAIA DGVLRCHTPL HKDGRVPFYV TCSNRLACSE VREFEYRIEN 600 LQDVDIPDIY SGSTNEILLR MRFGKMLSLE SGSPPSSVSS TLGENSHLSN KISSLLREDN 660 NEWEQMLMLT SEDEFSPEEV KEQLLQKLLK EKLHLWLLQK VAEGGKGPSV LDEGGQGVLH 720 FAAALGYDWA IPPTLAAGVS VNFRDVNGWT ALHWAAYCGR ERTVVVLLSL DAAPGALTDP 780 SPIYPGGQTP ADLASSKGHK GIAGYLAESA LSSHLQSLQL KDTKDGDEGK IPGVKDVQTV 840 SKQAATPIDD GDFPHGLSLK DSLAAVYNAT QAAARIHQVY RVQSFQRKQL KEYGNDKFGM 900 SDERALSLVV VKSRLGRHNE PVHAAAIRIQ NKFRSWKGRR EFLTIRQQIV KIQAHVRGHQ 960 VRKNYRSIIW SVGILEKVIL RWRRKGSGLR GFRQEALTQG SSKQDTPSNE DDYDFLKEGR 1020 KQTEERFEKA LARVKSMVQY PEARDQYRRL LNVVTEMQET KAVYDKVLNS TEDTADFDDD 1080 LIDFQALLDD DSFMSTEY

Sequence ? help Back to Top

Protein Sequence Length: 1098 aa Download sequence

MAEPRRYSLG TQQLDIEQIL LEAQHRWLRP FAEICEILQN YKKFRIAPEP ANKPPSGSLF  60
LFDRKVLRYF RKDGHNWRKK KDGKTVKEAH ERLKAGSVDV LHCYYAHGEE NENFQRRSYW  120
LLEEERSNIV LVHYREVKGN RANFSRIKEA EETIHNSQES EEIVPNSEVD SSVSSTFNPY  180
NYQVTSHATD TASLNSAQAS EYEDAESGYN HQASSGFHSF LELQPRVVEK MEDGLSVPYY  240
PVPFSNDYEG KLSAIPGMDF VPLVQGDKGK NSVNADLTFE PQKQLDFSSW KDVVGNSGTG  300
IQSDTMSFNP GQGNELLEQI LTNDFGKSED AGIYPPRQDK WQTSEGDSSH ISKWSMDQKF  360
YPESEYYPTT ELYRGVNAVD LLNSAGPFHA HSAEQNEHHT QSDLQIQSRS ALKPASENNP  420
IIEGKAESYP LKQPLLDSFL REGLKKLDSF DRWMSKELGD VNESHTQSNS GTYWETVETE  480
DGVDDSSIAP QAHLETYMLG PSLSQDQLFS IIDFSPNWAY AGSEIKVLIT GKFLMNQQDV  540
DKCKWSCMFG EVEVPAEAIA DGVLRCHTPL HKDGRVPFYV TCSNRLACSE VREFEYRIEN  600
LQDVDIPDIY SGSTNEILLR MRFGKMLSLE SGSPPSSVSS TLGENSHLSN KISSLLREDN  660
NEWEQMLMLT SEDEFSPEEV KEQLLQKLLK EKLHLWLLQK VAEGGKGPSV LDEGGQGVLH  720
FAAALGYDWA IPPTLAAGVS VNFRDVNGWT ALHWAAYCGR ERTVVVLLSL DAAPGALTDP  780
SPIYPGGQTP ADLASSKGHK GIAGYLAESA LSSHLQSLQL KDTKDGDEGK IPGVKDVQTV  840
SKQAATPIDD GDFPHGLSLK DSLAAVYNAT QAAARIHQVY RVQSFQRKQL KEYGNDKFGM  900
SDERALSLVV VKSRLGRHNE PVHAAAIRIQ NKFRSWKGRR EFLTIRQQIV KIQAHVRGHQ  960
VRKNYRSIIW SVGILEKVIL RWRRKGSGLR GFRQEALTQG SSKQDTPSNE DDYDFLKEGR  1020
KQTEERFEKA LARVKSMVQY PEARDQYRRL LNVVTEMQET KAVYDKVLNS TEDTADFDDD  1080
LIDFQALLDD DSFMSTEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein