PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069925.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 316aa    MW: 35845 Da    PI: 6.2955
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.63.6e-2292185290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 
                     fYn+YAk  GFs+rks+ +++ ++g++++r + Cs+eg+r ++  +  +ek+r ++a tr+gCka+++++ +     +gk++vt+++ +HnHela
  XP_028069925.1  92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageRGKYVVTHFVANHNHELA 185
                     *****************9999.666699999*********99988877899999****************987777789**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MALAEVKREG ANYDNPNEAD DIHLMNESRA EPYHGCETSP SNEEATNMNV EDGGADVKKE  60
MVDDAHRNDM VGDVERAILE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGERGK YVVTHFVANH  180
NHELAEQHCV MYLRSHRTLN SADKAQAMAM RNVGVKTSQI MDYMVNQSES YENVGFIRTD  240
LHNHIQAERR VEVEDGDAQD SKSRAEYAMF GDVLIFDSTY RTNAYKKPFV MLAGVTSHFR  300
TTIFACVLLA NETSEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-34FAR1 family protein