PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069971.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 214aa MW: 24374.8 Da PI: 9.9615

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.3	6.3e-24	29	116	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fY++Y+ ++GFs+r+++ +ks ++geit+r f Cskeg+r+ +kk ++ raetr+gC a++++k+++ +gk+ t++++ HnH++ XP_028069971.1 29 DFYDSYGGRIGFSIRREYAHKS-KTGEITSRAFACSKEGHRKADKKY-YIVNNARAETRIGCGASMNIKLNRkTGKYTATNFVEMHNHSV 116 6****************999.7888*************999.89999*************999*************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MANAQCGKDD TQFGPILGMK FDSEQFAYDF YDSYGGRIGF SIRREYAHKS KTGEITSRAF 60 ACSKEGHRKA DKKYYIVNNA RAETRIGCGA SMNIKLNRKT GKYTATNFVE MHNHSVVVNE 120 CAHMLHSQRK IFTSQSIEID LATDFGIPLR SSYELMSREA GGGECVRFFK QDQKNYLKNK 180 KIENVGIQRI REHIKILSRS DSRKSFILLC RAVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-23	FAR1 family protein