PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070027.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 137aa    MW: 14858.2 Da    PI: 10.9623
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.22.9e-34101133110
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksa 94 
                      k++ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ + WLl+  +pai e+tgt++ +a ++  ++s        +++     +++
  XP_028070027.1  10 IKRSATKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGEIVKWLLERVEPAIFEATGTGTVPAIAVsVNGSL-------KIPttPPTTTE 97 
                     58999**********************************************************88888444211111.......12221111112 PP

             TCP  95 akskksqksaasalnl 110
                     a+  k++++ a+++++
  XP_028070027.1  98 AQAAKKKRKRACTSEF 113
                     2333333333333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MIEKSKVGKI KRSATKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS DGEIVKWLLE  60
RVEPAIFEAT GTGTVPAIAV SVNGSLKIPT TPPTTTEAQA AKKKRKRACT SEFIDMSDSA  120
PTPAPSNFAP VTTMTPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.22e-49TCP family protein