PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070169.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 182aa    MW: 20190.7 Da    PI: 4.0519
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind75.87.8e-24100158260
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                     Flkk+++++ed++++ +isw+++++sfvv+d+++f++++LpkyFkh+nf+SF+RQL +Y
  XP_028070169.1 100 FLKKTFHMVEDPDTDIIISWTASQKSFVVWDHRQFSTNLLPKYFKHNNFSSFIRQLYTY 158
                     9********************999*********************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
METLKIKQEN IVVIDDDIPG GGGGGLFEEE EEEEEEETVK VVELNEEAVV LVDDDWVSGE  60
GVVLVGGGGG GGGDSMPCSP PISSAPKPMV GLHETGPSPF LKKTFHMVED PDTDIIISWT  120
ASQKSFVVWD HRQFSTNLLP KYFKHNNFSS FIRQLYTYVL DLKVDDLQML PRLEQMEMDR  180
CG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.16e-33HSF family protein