PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070310.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 179aa    MW: 19657.6 Da    PI: 5.0358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-171868155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+Wv+eIr+p   g +  r +lg++ tae Aa a++ a  +l+g
  XP_028070310.1 18 KKYKGVRRRK-WGKWVSEIRVP---G-TqDRLWLGSYSTAEAAAVAHDVASYCLRG 68
                    59*****998.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSSSDEGSSG GAITAEQKKY KGVRRRKWGK WVSEIRVPGT QDRLWLGSYS TAEAAAVAHD  60
VASYCLRGPS SYNNLNFPAT LPVGVRTDMS PQSVQKAASD AGMAVDAQFA MNQTQQQQTR  120
SSTSSSSSID SRSRDESKNV MNESNVNDGC FGVWEERMMS SHELEQREEA LNISVEDYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-37ERF family protein