PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070362.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 413aa MW: 45500.7 Da PI: 8.6185

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.8e-32	261	314	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_028070362.1 261 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 314 9****************************************************7 PP
2	Myb_DNA-binding	46.6	7.7e-15	262	313	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_028070362.1 262 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 313 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MPLEGIFIEP SSNPHQVPDL SLHLSPPNST TSICSIEELD TTKFNLSIRH ETLKSNTASS 60 FRTDTYQACT ELSLAHPANT LKDGGPCPRN FTGGAQVQPQ TPYHHHHQSH YIHQYPSSAS 120 ASTSTQLNHI NHGVSLLNVS SDGLEPIKGI PVYHNRKFPF LPSDNARDPK MSLYPMSSPY 180 LVNSLDPTMS ILNSRPNTSL SPHRITGAMR INGLSSSYPL QHHRHHNQYG NGCGVGASAH 240 EMMRSTRFIP KLPTKRSMRA PRMRWTSTLH ARFVHAVELL GGHERATPKS VLELMDVKDL 300 TLAHVKSHLQ MYRTIKTTTT DKPAASSGQS DGSGEEEMST MGNASDRSQF IDQRSGLSDG 360 SFPQETDFPS TLRTSSSSNG EAWLQTSSND NNGLRPLTLP SRQRSGHNIE VLT

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MPLEGIFIEP SSNPHQVPDL SLHLSPPNST TSICSIEELD TTKFNLSIRH ETLKSNTASS  60
FRTDTYQACT ELSLAHPANT LKDGGPCPRN FTGGAQVQPQ TPYHHHHQSH YIHQYPSSAS  120
ASTSTQLNHI NHGVSLLNVS SDGLEPIKGI PVYHNRKFPF LPSDNARDPK MSLYPMSSPY  180
LVNSLDPTMS ILNSRPNTSL SPHRITGAMR INGLSSSYPL QHHRHHNQYG NGCGVGASAH  240
EMMRSTRFIP KLPTKRSMRA PRMRWTSTLH ARFVHAVELL GGHERATPKS VLELMDVKDL  300
TLAHVKSHLQ MYRTIKTTTT DKPAASSGQS DGSGEEEMST MGNASDRSQF IDQRSGLSDG  360
SFPQETDFPS TLRTSSSSNG EAWLQTSSND NNGLRPLTLP SRQRSGHNIE VLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-57	G2-like family protein