PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070547.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 341aa    MW: 39487.8 Da    PI: 6.6082
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.53.6e-2638126190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ +vGFs+rk++ +ks + geit+rtfvCskeg r+ +k++    r +r++trtgC a + +k+ +  gk++v+++++ HnH+l+
  XP_028070547.1  38 DFYNSYGGRVGFSIRKEYAHKS-KIGEITSRTFVCSKEGLRKYDKRD-FAVRIPREKTRTGCGALMSIKLIRqIGKYRVINFVETHNHPLV 126
                     6********************9.6677*****************999.9999******************9989***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGVNHGENLE VLDISKMDDL TIATQMDVHG EDDTQSYDFY NSYGGRVGFS IRKEYAHKSK  60
IGEITSRTFV CSKEGLRKYD KRDFAVRIPR EKTRTGCGAL MSIKLIRQIG KYRVINFVET  120
HNHPLVVSAI AHMLPSQRKI STSQYIEIDL ADDCGIPLRS SYELMGREAG GRECVGFLKK  180
DQENYLRTKR QRMLEFGEAW SILKYFQDQT VQNPSFFHSV QLATEEQITN IFWADARMII  240
DYGQFGDVVT FDTTYKINRE SRPFAIFVGF NNHRETIVFG AALIGLGGVR SVLGKFIDEY  300
EEEEEFFAAW NAMLDEFDVY DNSWLQSIFH LRKKWVRAYV R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-56FAR1 family protein