PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070874.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 254aa    MW: 28741.2 Da    PI: 6.9712
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix841.9e-2674155286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W ++e++ Li +rre++  ++++k++k+lW+++s+kmre+gf rs+++C++kw+nl k++kk k+++++    +s +++y+++le
  XP_028070874.1  74 WVQEETRSLISFRREVDGLFNTSKSNKHLWDQISAKMREKGFDRSATMCTDKWRNLLKEFKKAKHQDRSS---ASAKMSYYKELE 155
                     ********************************************************************85...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MYLSEKPLPI DFYKGGGGGG ERDMVIEVSS NGELPPHHHH LQQQQQQQQQ MILGDSSGGE  60
DHEVKAPKKR AETWVQEETR SLISFRREVD GLFNTSKSNK HLWDQISAKM REKGFDRSAT  120
MCTDKWRNLL KEFKKAKHQD RSSASAKMSY YKELEELLRG RSKNGPYKSP SSSKVDLYIQ  180
FSDKGLEDGN IPFGPVEAGG QSTVNLERPL DHDGDPLAIT AADAVAASGV PPWNWRETPV  240
NGVYLILFFF FFFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.31e-104Trihelix family protein