PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070970.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 306aa MW: 33715.7 Da PI: 8.2579

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61	2.5e-19	19	64	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEde l ++v+++G ++W++I+r ++ gR++k+c++rw + XP_028070970.1 19 KGPWSTEEDESLQKLVQRHGARNWSLISRFIP-GRSGKSCRLRWCNQ 64 79****************************.*********985 PP
2	Myb_DNA-binding	53.9	4.1e-17	73	115	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+l+++a++++G++ W+tI+r ++ gRt++ +k++w++ XP_028070970.1 73 AFSPEEDDLILRAHARFGNK-WATISRLLN-GRTDNAVKNHWNST 115 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MENRSWVMEA TQKDVDRIKG PWSTEEDESL QKLVQRHGAR NWSLISRFIP GRSGKSCRLR 60 WCNQLSPEVE HRAFSPEEDD LILRAHARFG NKWATISRLL NGRTDNAVKN HWNSTLKRKF 120 PAAMLEGDAG GGGDERGGGQ VIRRLESGDV TVGINSESPS ASASDASDSS VQVISQMNVN 180 SNLFRPIARP VESTPISEMV IPPPPTALTL SLFGDSHPYE IHDKNYSPSP SAVTQPSHSR 240 SQSTESGPST AAAVEKPMFS TEFLNVMQEM IKKEVRSYLS RGLDQSGMEG SVRNAGVKRI 300 GISRID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-70	MYB family protein