PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071332.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 135aa    MW: 15728.7 Da    PI: 10.028
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.47e-1375122148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+W+ eEd++l+++++++    W+  ++  g+ R++k+c++rw +yl
   XP_028071332.1  75 KGAWSREEDQKLINYINRYRIWIWSEMPKAAGLLRSGKSCRLRWVNYL 122
                      79*****************999**********99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MAIKIPKGMT VLQACEVAGV EIPRFCYHSR LSIAENCRTC LVQVEKSPKP VASCTMPALR  60
EMVRTLHFGK TTLKKGAWSR EEDQKLINYI NRYRIWIWSE MPKAAGLLRS GKSCRLRWVN  120
YLMIYFHIVD MRPCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.25e-19MYB family protein