PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071437.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 178aa    MW: 20032 Da    PI: 9.12
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-091361655
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    + +E++RR+++++ +++L +l+ + +  ++++ +s  +   +A +YIk+Lq
  XP_028071437.1 13 KTIEKNRRNQMKTLYSKLHSLVHPhN--TKQEAMSLTDQIDEAANYIKKLQ 61
                    679*******************9956..56666*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEHNPSSSIN DRKTIEKNRR NQMKTLYSKL HSLVHPHNTK QEAMSLTDQI DEAANYIKKL  60
QKNLEKLKQK RDSLMGVEKP KARMKSTTNV GLRSPQIEIN MMGSALDVVL ITGLDCQFMF  120
NETIRVIHEE GAEIVNASFS VVDDTVFHTI HSKVGESGLG CGVASITERL KKFVYDAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-38bHLH family protein