PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071708.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 447aa    MW: 49442 Da    PI: 4.8108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-19211261256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_028071708.1 211 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 261
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MDQSGNSGKS KKVIEETEKM AQMEWVRDQT KDFDIGFERP QWKPVFEEAS MSSRPLKKVK  60
SPERQDPFQS SVSSAQQTPS LSLSSSVPYT TTAPIAFPPS SSSRLVFPFA LDNSQQSMEN  120
LHQFQTNPPP LFLQPPQNQQ QMISFAPQNQ SLGFPPYFAG DSAPSQQQLL QYWSDALNLS  180
PRGRMMMMNR LGQDGRGLFR PPVPPISPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT  240
FDTAEDAALA YDREAFKLRG ENARLNFPEL FLNKDRAASS APGSSSSSPP TPHGNLAPSR  300
YSKQPQEASE GPNLEVSSME MPPPEWPKPQ EDNPDEDSGL GSSEVTVAGG SGAGEGILES  360
SELVWGDMAE AWMNAIPAGW GPGSPVWDDL DTTNNLLLPS NLPFANVHQQ DLSGSNPQKQ  420
EQNIAPADSS SSSSSCPMKP FFWKDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-57ERF family protein