PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072062.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 408aa MW: 47111.8 Da PI: 8.4545

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	4e-21	26	120	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a t +gCka+++++ + gk++vt+++ +HnHel XP_028072062.1 26 DFYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTGVGCKAQFRIRYDAnageGGKYVVTHFVADHNHEL 119 6***************9999.666699999*****99988877899999***********9987667789************9 PP FAR1 90 a 90 a XP_028072062.1 120 A 120 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MLIAMTWLVM LNVLFWNRNL IRSGEDFYNA YAKAKGFSIR KSRFNTNKEG KVVSRLWLCS 60 REGQRLPKYL DRVAEKSRAP KALTGVGCKA QFRIRYDANA GEGGKYVVTH FVADHNHELA 120 EQHCVMYLRS HRSLNSADKA QAMAMRNVGM KTSQIMDYMV NQSGSYENVG FIRTDLHNHI 180 QDERRAEVED GDAQGALVYL CAKLDVDACF FYKYDVCNDN KLQNLFWADS KSRADYAKFG 240 DVLIFDSTYR TNAYKKPFVM LAGVTSHFRT TIFACVLLAN ETIETYTWVL ETFMEAMGNK 300 APVSVLIDGD KAMREAIRRV FSDARHRLCN WHFEKNAVSN VHISGFAHAF KQCMDMETDE 360 TKFEHGWTTM VEEFGLQTNS WVLETYEKRH MWAEAYMRGH FFAGMKHV

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MLIAMTWLVM LNVLFWNRNL IRSGEDFYNA YAKAKGFSIR KSRFNTNKEG KVVSRLWLCS  60
REGQRLPKYL DRVAEKSRAP KALTGVGCKA QFRIRYDANA GEGGKYVVTH FVADHNHELA  120
EQHCVMYLRS HRSLNSADKA QAMAMRNVGM KTSQIMDYMV NQSGSYENVG FIRTDLHNHI  180
QDERRAEVED GDAQGALVYL CAKLDVDACF FYKYDVCNDN KLQNLFWADS KSRADYAKFG  240
DVLIFDSTYR TNAYKKPFVM LAGVTSHFRT TIFACVLLAN ETIETYTWVL ETFMEAMGNK  300
APVSVLIDGD KAMREAIRRV FSDARHRLCN WHFEKNAVSN VHISGFAHAF KQCMDMETDE  360
TKFEHGWTTM VEEFGLQTNS WVLETYEKRH MWAEAYMRGH FFAGMKHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-74	FAR1 family protein