PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072085.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 202aa MW: 22584.3 Da PI: 5.7495

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.2	8e-05	119	139	34	54
TTS-STCHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksL 54 +++ ++Ka+i + A++YI++L XP_028072085.1 119 SQGEMDKASIIKDAIDYIQEL 139 56779**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MLLNAPAIRD GMVDRLKWNA GNLGVFTVSS TYEWSAASVE ASSNLVGYAD SDDSRSRRKK 60 KSRSSRRSRK SESVGDSESD ELSDQCHCLE LKDILAMEGH SGLVKVMPLL STFNKESVSQ 120 GEMDKASIIK DAIDYIQELH EQERRIQADL IQLESGKLKK NAVFDLDQEI PTLSRLKKKG 180 IDHSYDSRRS TTSSIEDLEV SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.4	1e-08	bHLH family protein