PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072253.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 155aa    MW: 17530.2 Da    PI: 9.4962
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH292e-091461554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                     ne+E+ RR ++++ +++L +l+P++   ps+  l   ++L++A++Y+ +L
  XP_028072253.1 14 RNEIEKSRRLQLKDLYSKLASLIPNQ---PSEEgLPLRDMLKQATKYVVEL 61
                    69***********************8...78888*************8665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MQPRGSGSSS KLDRNEIEKS RRLQLKDLYS KLASLIPNQP SEEGLPLRDM LKQATKYVVE  60
LKQNVEELKR RKAALKGDEG GSKEERSPVL MVRNMGSTLE VNLSTGLDKE FKLHEVLSVL  120
KEEGVEVVSA SYTTVGNQIF YTIHAQVYIY IYKVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-26bHLH family protein