PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072304.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 353aa    MW: 41126.9 Da    PI: 8.7299
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.77e-2231119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y  ++GFs+++s+ +k+ ++g+it+r fvC+keg+r  +k++   ++++r+e rtgC+a+l +k ++  +k+ v ++ ++HnH ++
  XP_028072304.1  31 NFYNAYEGRLGFSIKRSYVNKN-KEGQITSRLFVCNKEGFRGVDKRD-PLTKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFIEQHNHIFV 119
                     6********************9.6677*****************999.999******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MEPNNVENDG GDCDWKLRVH MTFDTEQKAY NFYNAYEGRL GFSIKRSYVN KNKEGQITSR  60
LFVCNKEGFR GVDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFVGEF IEQHNHIFVP  120
TECTHMLPSQ RKISASQTTK IDLAEKSGIR LNTTFELMGN EASGRESLGF TKVDQKNYLR  180
TKRQKSLAYG EACSILQYFH EKTLENPSFF YSVQLHSEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTSYKL NSAHRPFRLS LDLTIIGKLR FLEAMSSKAP KIIFTDQDTA MAKTIPIVMP  300
NTKHRLCTWH LMQNALRHAN SIFKDKEVKD KEMKSVLSKF MYDIEDEDDF ILK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-60FAR1 family protein