PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072356.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 346aa MW: 39539 Da PI: 6.6002

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.4	4.3e-17	57	143	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y +Y+k+ GF v+k++ kk +ge + t+ C++ gk+ ++++ + r++trtgCka+++ ++ dg w + +l+leHnH+++p XP_028072356.1 57 EYYATYGKKNGFAVSKKNCKKG-GDGEKKYITLACTRAGKAIIKTSN---LVKLRPQTRTGCKACINAILQPDGMWLLRSLVLEHNHKMSP 143 69*************99987.89999*********999887...8999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MDEEIWSGSL SEGINEINIE NEMEETENVE VETENVEVET EDPKVGMMFK SSDEVYEYYA 60 TYGKKNGFAV SKKNCKKGGD GEKKYITLAC TRAGKAIIKT SNLVKLRPQT RTGCKACINA 120 ILQPDGMWLL RSLVLEHNHK MSPTKSRFFK QNRILEPHVK RRLQLNDRAG IRMNKNFTSL 180 VLEAGGREKL SYLEKDCRNH IDKVHRLRLE EVDATAMYNY FVKMQGDNSD FFYVMDLDGN 240 GRLQNVFWAD ARSRAAFKEF GDVVTFDTTY LVNKYDMPFA PFVGVNHHGQ STLLGCGLIS 300 HEDTETFTWL FQSWLACMFG CPPNAIITDQ DKAMKKATEI VFPNAH

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MDEEIWSGSL SEGINEINIE NEMEETENVE VETENVEVET EDPKVGMMFK SSDEVYEYYA  60
TYGKKNGFAV SKKNCKKGGD GEKKYITLAC TRAGKAIIKT SNLVKLRPQT RTGCKACINA  120
ILQPDGMWLL RSLVLEHNHK MSPTKSRFFK QNRILEPHVK RRLQLNDRAG IRMNKNFTSL  180
VLEAGGREKL SYLEKDCRNH IDKVHRLRLE EVDATAMYNY FVKMQGDNSD FFYVMDLDGN  240
GRLQNVFWAD ARSRAAFKEF GDVVTFDTTY LVNKYDMPFA PFVGVNHHGQ STLLGCGLIS  300
HEDTETFTWL FQSWLACMFG CPPNAIITDQ DKAMKKATEI VFPNAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	1e-63	FAR1 family protein