PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072361.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 169aa MW: 19173.8 Da PI: 9.6741

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.1	1.9e-20	26	87	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t eq+++L +lF+ r+ps++++++++++l +++ ++V++WFqN++a+e++ XP_028072361.1 26 KCGRWNPTVEQVKVLTDLFRAgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 87 568***************99************************************97 PP
2	Wus_type_Homeobox	112.7	1.9e-36	26	89	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt eQ+k+L++l+++GlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_028072361.1 26 KCGRWNPTVEQVKVLTDLFRAGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 89 578***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MDDIGMSGFC VKPRCGGGNG GGAGNKCGRW NPTVEQVKVL TDLFRAGLRT PSTDQIQKIS 60 SQLSFYGKIE SKNVFYWFQN HKARERQKRR RVSVTEQHEI HREDRVSVSS AKHLVSINQV 120 SGPERAMETL QLFPLNSFSE SDSEKLRLFA NECKAEMNHP PLDLRLSFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	92	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	3e-56	WOX family protein