PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072382.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 195aa    MW: 23019.3 Da    PI: 8.9481
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.77.6e-1773158591
                     -..-HHHHTT-E..E--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   5 ltpsdvlksgrl..vlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     + ps+v k  +l  ++pkk a +h ++  +s++++l+  ++ ++W+ ++  r ++ ++v  kGW++F  +n+L+e D+++F+l++  +++
  XP_028072382.1  73 MQPSHVYKFFLLmqTIPKKWAVRHISN--RSQEIQLRVpPREKKWTAQV--RYRPAGIVVHKGWSKFSVDNNLEEHDVCIFELSQGGKGN 158
                     556666666555559*********766..7789***998999*******..888888**************************9774443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MMQKKEEEDS IDIINRDEDE EELKMENDVG KRVDNIRLSY STNRRQVTEE EKQRAYRLAT  60
RHSSDLPSVL ITMQPSHVYK FFLLMQTIPK KWAVRHISNR SQEIQLRVPP REKKWTAQVR  120
YRPAGIVVHK GWSKFSVDNN LEEHDVCIFE LSQGGKGNNM PVVLDVFIYR VVDELVPLTQ  180
SYVPLSHQKI TRREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-16B3 family protein