PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072700.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 260aa MW: 29878.4 Da PI: 7.3921

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.8e-07	25	69	4	46
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT+eE +++ +a + + +W +a+ ++ g+++ ++ ++ XP_028072700.1 25 WTKEENKRFEEALAIFDEQspdRWFQVAALIP-GKSASDVWRHYKE 69 ***************99*********.*****999975 PP
2	Myb_DNA-binding	41.2	3.9e-13	124	168	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++ + +++G g+W+ I+r + ++t+ q+ s+ qky XP_028072700.1 124 PWTEDEHRRFLMGLQKHGRGDWRNISRNFVITKTPTQVASHAQKY 168 8***************************889*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
METLRPSSYF PNLNLWMQAS RIAIWTKEEN KRFEEALAIF DEQSPDRWFQ VAALIPGKSA 60 SDVWRHYKEL EADVSDIEAG LVPIPGYLTS SFTLEMVDSR GFDEFRKRNL MGRGSDQERK 120 KGVPWTEDEH RRFLMGLQKH GRGDWRNISR NFVITKTPTQ VASHAQKYFM RQNSGGKDKR 180 RPSIHDITTV HLTDTCQSIN SEPSSHNSLG TPKIVLNWSQ SNDGAVMVFD SSHDNSFMQY 240 PYEIASHGLN SMFHIQSTGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05790.1	1e-84	MYB family protein