PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072838.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 102aa    MW: 12027.3 Da    PI: 4.6654
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.31e-092795245
                     SSS-HHHHHHHHHHHHHTTTT..........................-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg..........................tWktIartmgkgRtlkqcksrwq 45
                     + ++++E+ l+++ +++ G +                          +W++Ia +++ gRt++++  +w+
   XP_028072838.1 27 LQFSEDEETLIIRMFNLVGERfyfscffffffylrnkikvnlicgsiRWSLIAGRIP-GRTAEEIEKYWN 95
                     579******************************************************.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MADLDHSTED TSGDSRDDNN SHQGSELQFS EDEETLIIRM FNLVGERFYF SCFFFFFFYL  60
RNKIKVNLIC GSIRWSLIAG RIPGRTAEEI EKYWNSRYST SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.18e-12MYB_related family protein