PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072847.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 216aa    MW: 24969.5 Da    PI: 8.9149
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1561.3e-1749135191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     ++Y++Y+k+ GF v+k++ k+  ++ge +  t  C++ gk++ ++++     + r++t+tgCka l+ +++ dg w v +l+leHn e++p
  XP_028072847.1  49 EYYSRYGKKNGFAVSKKYCKRG-DDGEKKYVTIACTRAGKAKIKTSN---IVKLRPQTKTGCKAGLNANLQGDGMWIVRSLRLEHNYEMSP 135
                     69***************99997.8999***************99888...999*********************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDKEISSGSN EDCDEIDIET EKEDTKNVEV EIEDPKVGMT FKPIDEIYEY YSRYGKKNGF  60
AVSKKYCKRG DDGEKKYVTI ACTRAGKAKI KTSNIVKLRP QTKTGCKAGL NANLQGDGMW  120
IVRSLRLEHN YEMSPSKSHF FKQNRILEPH VQRRLELNDS ARIRMNKNFT LLVLEAGGHE  180
KLSYLEKYCR NHMDKVRRLK LEKGDATAMY DYFTCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.27e-21FAR1 family protein