PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072877.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 352aa    MW: 38316.7 Da    PI: 6.894
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.59.3e-28103183271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e              d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_028072877.1 103 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgngltspdqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 183
                     689********...*****999*****************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MVSGGGGRGG GNNQQEGEKN PSVVSRGGGT RSWGTTVSGQ SVSTSGSVGS PSSRSEAAMA  60
TPASDTTFFR LNHLDIDADD TGSQGAAGKK KKRGQRAVGG DKSGRGLRQF SMKVCEKVES  120
KGRTTYNEVA DELVAEFADP GNGLTSPDQY DEKNIRRRVY DALNVLMAMD IISKDKKEIQ  180
WKGLPRTSLN DIELLKTERL GLRSKIDKKA AYMQELEEQF IGLQNLIQRN EQLYSSGNSP  240
SGGVALPFIL VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDNYVLKA MKFCERPQGD  300
EVAPNFSTDG GEGSSMSFHT QITQPARSNV PDRPLTSPPL PGILKARVKH EH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-130E2F/DP family protein