PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072916.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 380aa MW: 44283.2 Da PI: 6.9125

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.7	3.5e-22	31	118	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+ ++GFs+r+ + +k ++g+it+r+fvC+keg+r +k++ ++++r+e rtgC+a+l++k ++ +k+ v++++++Hn + XP_028072916.1 31 DFYNTYGGRLGFSIRRGYVNKG-KDGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnMQKFFVSDFVEQHNNIF 118 6***************9998.7888************9999.999**************999899**********765 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MEPNNHENDG GEGDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KGKDGQITSR 60 QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NMQKFFVSDF VEQHNNIFVP 120 TECTHMLPSQ RKISASQATE IDLAEKYGIR LNAAFELIDN EEQITNIFWA DAQMIMDYGQ 180 FGDVVTFDTT YKLNSAHRPF ASFVGFNHHR ETVIFGAALM YDETVDSFVW LFKRFLEAMS 240 SKAPKTIFTD QDAAMAKAIP IVMPNTTHRL CTWHLMQNAL RHANSIFKDK AVKDKGMKSV 300 LSTFMYNIED EEEFTLKWKE MLDKYEVRDN HWLKLTFGVK EKWGWPYVRN AWGAGMSSTQ 360 LSESFNAFLK DFIQSDHNLM

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MEPNNHENDG GEGDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KGKDGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NMQKFFVSDF VEQHNNIFVP  120
TECTHMLPSQ RKISASQATE IDLAEKYGIR LNAAFELIDN EEQITNIFWA DAQMIMDYGQ  180
FGDVVTFDTT YKLNSAHRPF ASFVGFNHHR ETVIFGAALM YDETVDSFVW LFKRFLEAMS  240
SKAPKTIFTD QDAAMAKAIP IVMPNTTHRL CTWHLMQNAL RHANSIFKDK AVKDKGMKSV  300
LSTFMYNIED EEEFTLKWKE MLDKYEVRDN HWLKLTFGVK EKWGWPYVRN AWGAGMSSTQ  360
LSESFNAFLK DFIQSDHNLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-75	FAR1 family protein