PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072964.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 220aa    MW: 24983.1 Da    PI: 9.8005
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.96.7e-261511336128
             NAM  36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWv 122
                     e +i++++P++Lp  +++  +  +fF++ +k+y+tg+rk+r+++      + +W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wv
  XP_028072964.1  15 ENGICYTHPEKLP-GISKVGQIRHFFHRPSKAYTTGTRKRRKVHtnedggETRWHKTGKTRPVLV-GGTVKGFKKILVLYtnYGRQRKPEKTNWV 107
                     337**********.444445677******************744446655778************.99************66589********** PP

             NAM 123 mheyrl 128
                     mh+y+l
  XP_028072964.1 108 MHQYHL 113
                     ****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
IHPLIDEFIP TIDGENGICY THPEKLPGIS KVGQIRHFFH RPSKAYTTGT RKRRKVHTNE  60
DGGETRWHKT GKTRPVLVGG TVKGFKKILV LYTNYGRQRK PEKTNWVMHQ YHLGNNEEER  120
DGEVVVSKVF YQTQPRQCGS TSSLTDSVFD QKSSHVIENT QGYVEGYYNP TTLISYDIRF  180
GGQNRDITPQ LIPNLGIQGV GSSYIHLPNN ASKGKVLERE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.12e-88NAC family protein