PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073173.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 631aa MW: 69124.8 Da PI: 7.0223

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.3e-09	516	564	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v+++G g+W+ I r Rt ++k++w+++l XP_028073173.1 516 PWTLSEVVKLVEGVARYGAGRWSEIKRLSFasySYRTSVDLKDKWRNLL 564 8*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
METVVGVEGN DEAKFDDVPV VKTSSPLSSP REIADPVVYK LVRVDRDGRL VPATDDEVME 60 VEDLLEDDKS ERLPVAGAGQ NVGYTSNDGC PPIKTQFNGS EGQSENPEVN AERSNAQLDT 120 GVGMGKLDDE HEVVFGLSFL QHETIPSLET NSNESHIDQL GSGGECSSPL DGPIKSGSSI 180 SAICTSSKPD FSKLKGEICL DNLSVRELHE TFKATFGRET SVKDKQWLRR RIAMGLANSC 240 DVSTTTFVIK DNKVVKKGKE ESFKSVDHTP AKVLAVGVNE NCGGSPIGCN NQIENPQSVC 300 GKILTDPSLE YDCSVEDLNT EQRAAKRVRK PTKRYIEELS EVESRDYSGK LISSVKSSGQ 360 SLSSPISRVR PVRDSQSDGR PVVTRQDSLG GSGVQVPYVC RVRRSRPREN FMALMKLQPS 420 SMGMAANLVK KALGVSGAQP DNEVGNKVFK ARSASGWIQK PLVAEPEKDK HYQEIKASEL 480 DKDIELKHLD SSGDYSDDLV TVPTAKGGMR RKHHRPWTLS EVVKLVEGVA RYGAGRWSEI 540 KRLSFASYSY RTSVDLKDKW RNLLRASFAQ SPAEKGMQGS RKHASVPIPA PILLRVRELA 600 EMQAQVPPNL SSSKFAVCSD RNVNETRLGY L

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

METVVGVEGN DEAKFDDVPV VKTSSPLSSP REIADPVVYK LVRVDRDGRL VPATDDEVME  60
VEDLLEDDKS ERLPVAGAGQ NVGYTSNDGC PPIKTQFNGS EGQSENPEVN AERSNAQLDT  120
GVGMGKLDDE HEVVFGLSFL QHETIPSLET NSNESHIDQL GSGGECSSPL DGPIKSGSSI  180
SAICTSSKPD FSKLKGEICL DNLSVRELHE TFKATFGRET SVKDKQWLRR RIAMGLANSC  240
DVSTTTFVIK DNKVVKKGKE ESFKSVDHTP AKVLAVGVNE NCGGSPIGCN NQIENPQSVC  300
GKILTDPSLE YDCSVEDLNT EQRAAKRVRK PTKRYIEELS EVESRDYSGK LISSVKSSGQ  360
SLSSPISRVR PVRDSQSDGR PVVTRQDSLG GSGVQVPYVC RVRRSRPREN FMALMKLQPS  420
SMGMAANLVK KALGVSGAQP DNEVGNKVFK ARSASGWIQK PLVAEPEKDK HYQEIKASEL  480
DKDIELKHLD SSGDYSDDLV TVPTAKGGMR RKHHRPWTLS EVVKLVEGVA RYGAGRWSEI  540
KRLSFASYSY RTSVDLKDKW RNLLRASFAQ SPAEKGMQGS RKHASVPIPA PILLRVRELA  600
EMQAQVPPNL SSSKFAVCSD RNVNETRLGY L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-124	MYB_related family protein