PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073239.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 548aa MW: 60589.3 Da PI: 6.343

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.7	2.6e-28	96	149	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt +LH++Fv av+qL G+++A+Pk+il++m+v+ Lt+e+v+SHLQkYRl XP_028073239.1 96 KPRVVWTVDLHRKFVAAVNQL-GIDEAVPKRILDMMNVEKLTRENVASHLQKYRL 149 79*****************.******************************8 PP
2	Myb_DNA-binding	38.9	2e-12	98	148	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT +++ ++v av+qlG + +k+I +m+ +++t++++ s++qky+ XP_028073239.1 98 RVVWTVDLHRKFVAAVNQLGIDeaVPKRILDMMNvEKLTRENVASHLQKYR 148 678******************************99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MKGITHGACD YLLKPIRIEE LKNIWQHVVR RKKNDPKDQN NFDKPHHESE GGQAITVTGD 60 SDQNSKLNRK RKEQNEDEGD RADDGQNNED PSMQKKPRVV WTVDLHRKFV AAVNQLGIDE 120 AVPKRILDMM NVEKLTRENV ASHLQKYRLY LKRISCVASQ QANIVAALGG ADSAYLQMSS 180 LNGFGNYHSM VGSAKFQNPT VGSFSSSGML DRLNTPAVLG SCGLSLTGMI QSKFQPVILS 240 GNQNGNTFQG MPTSLEFDQL QHNNGVEHFG DLSTGTNDSM VFPISGDFLD TNINGSSSRN 300 SLHGVPYNPV TLQGHPQPQE IERRGVCGNQ SRVSVEEFPS HLPDFARCTD TWPAIQSSEI 360 QSNSFTSSDF RINMSSIAMD GWSNSHDISS VNSTNAQFPE LRTDLKCLAT PGLGSNGEQR 420 MNYGMKSGWD HNKLDASHNP NLMHSPMNSL IPHGVMNSSS QRSDPMNAVG NRNNDFRMIG 480 QPNLVDHHLS MQRNGVEQSA MEATVNIKQG YSYNNDDSLE DLVSAMMKQE NIRDGDFGCE 540 THSLGTCI

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MKGITHGACD YLLKPIRIEE LKNIWQHVVR RKKNDPKDQN NFDKPHHESE GGQAITVTGD  60
SDQNSKLNRK RKEQNEDEGD RADDGQNNED PSMQKKPRVV WTVDLHRKFV AAVNQLGIDE  120
AVPKRILDMM NVEKLTRENV ASHLQKYRLY LKRISCVASQ QANIVAALGG ADSAYLQMSS  180
LNGFGNYHSM VGSAKFQNPT VGSFSSSGML DRLNTPAVLG SCGLSLTGMI QSKFQPVILS  240
GNQNGNTFQG MPTSLEFDQL QHNNGVEHFG DLSTGTNDSM VFPISGDFLD TNINGSSSRN  300
SLHGVPYNPV TLQGHPQPQE IERRGVCGNQ SRVSVEEFPS HLPDFARCTD TWPAIQSSEI  360
QSNSFTSSDF RINMSSIAMD GWSNSHDISS VNSTNAQFPE LRTDLKCLAT PGLGSNGEQR  420
MNYGMKSGWD HNKLDASHNP NLMHSPMNSL IPHGVMNSSS QRSDPMNAVG NRNNDFRMIG  480
QPNLVDHHLS MQRNGVEQSA MEATVNIKQG YSYNNDDSLE DLVSAMMKQE NIRDGDFGCE  540
THSLGTCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-74	ARR-B family protein