PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073240.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 523aa MW: 57639.7 Da PI: 5.6611

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46	1.1e-14	95	124	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 kA+Pk+il++m+v+ Lt+e+v+SHLQkYRl XP_028073240.1 95 KAVPKRILDMMNVEKLTRENVASHLQKYRL 124 8****************************8 PP
2	Response_reg	45.8	3.4e-16	20	94	1	75
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpii 75 vl vdD+p+ +++l+++l+k +y +v++++++ al+ l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i XP_028073240.1 20 VLAVDDDPICLRVLETLLRKCQY-HVTTTSQAITALKVLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVI 94 799******************.***********888888****************987633.3356665 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MIVDQSFDEP NDRFPMGMRV LAVDDDPICL RVLETLLRKC QYHVTTTSQA ITALKVLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIKAVPKR ILDMMNVEKL TRENVASHLQ 120 KYRLYLKRIS CVASQQANIV AALGGADSAY LQMSSLNGFG NYHSMVGSAK FQNPTVGSFS 180 SSGMLDRLNT PAVLGSCGLS LTGMIQSKFQ PVILSGNQNG NTFQGMPTSL EFDQLQHNNG 240 VEHFGDLSTG TNDSMVFPIS GDFLDTNING SSSRNSLHGV PYNPVTLQGH PQPQEIERRG 300 VCGNQSRVSV EEFPSHLPDF ARCTDTWPAI QSSEIQSNSF TSSDFRINMS SIAMDGWSNS 360 HDISSVNSTN AQFPELRTDL KCLATPGLGS NGEQRMNYGM KSGWDHNKLD ASHNPNLMHS 420 PMNSLIPHGV MNSSSQRSDP MNAVGNRNND FRMIGQPNLV DHHLSMQRNG VEQSAMEATV 480 NIKQGYSYNN DDSLEDLVSA MMKQENIRDG DFGCETHSLG TCI

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MIVDQSFDEP NDRFPMGMRV LAVDDDPICL RVLETLLRKC QYHVTTTSQA ITALKVLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIKAVPKR ILDMMNVEKL TRENVASHLQ  120
KYRLYLKRIS CVASQQANIV AALGGADSAY LQMSSLNGFG NYHSMVGSAK FQNPTVGSFS  180
SSGMLDRLNT PAVLGSCGLS LTGMIQSKFQ PVILSGNQNG NTFQGMPTSL EFDQLQHNNG  240
VEHFGDLSTG TNDSMVFPIS GDFLDTNING SSSRNSLHGV PYNPVTLQGH PQPQEIERRG  300
VCGNQSRVSV EEFPSHLPDF ARCTDTWPAI QSSEIQSNSF TSSDFRINMS SIAMDGWSNS  360
HDISSVNSTN AQFPELRTDL KCLATPGLGS NGEQRMNYGM KSGWDHNKLD ASHNPNLMHS  420
PMNSLIPHGV MNSSSQRSDP MNAVGNRNND FRMIGQPNLV DHHLSMQRNG VEQSAMEATV  480
NIKQGYSYNN DDSLEDLVSA MMKQENIRDG DFGCETHSLG TCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	3e-41	ARR-B family protein