PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073249.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-other
Protein Properties Length: 236aa    MW: 26179.2 Da    PI: 7.0611
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox352.4e-11164215354
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                      R +++k q+e+Le++F +++ p+ +++  + + ++L+ ++V  WF  +Ra 
  XP_028073249.1 164 ARKRLKKVQVETLERVFDRTKRPTNAMISSIVHVTNLPRKKVVKWFEDKRAE 215
                     58999*********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSYFTSYEGR IVTFGDSSTS SVITKGSISA PSLPKLDNVL LVDVVDDTSS PIASLHDEEE  60
GNSQPTKVLS CGILWLRLIF LVLQIKNLAA DVCLDRAVVL QLLRDPPPSL LLMSAALPDK  120
PISVISEPES KPLEEVSSET AADVAQPEAM VNLPVHVMQK SWSARKRLKK VQVETLERVF  180
DRTKRPTNAM ISSIVHVTNL PRKKVVKWFE DKRAEHGVPD HRLPYQRSAP ETVFNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164172ARKRLKKVQ
2166207KRLKKVQVETLERVFDRTKRPTNAMISSIVHVTNLPRKKVVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-45HB-other family protein