PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073335.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 296aa MW: 32013.3 Da PI: 6.8583

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.6	1.6e-34	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt+eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl XP_028073335.1 42 KPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	77.4	2e-24	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ XP_028073335.1 44 RLRWTSELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 95 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MYSAIHSLPL DGGVGVHGDF QGALDGTNLP ADACLVLTTD PKPRLRWTSE LHERFVDAVT 60 QLGGPDKATP KTIMRTMGVK GLTLYHLKSH LQKYRLGKQS CKDLLDNSKD VGIAASCIAE 120 TQDTGSSTSS SSKIAQDLND GYQVTEALRV QMEVQRRLHD QLEVQRRLQL RIEAQGKYLQ 180 SILEKACRAL SDQAAATAGL EAAREELSEL AINVSNDCNG MVHVETPNLP SFSVLASSLE 240 NRNASNLPAR FGDCSVDNCL TTSNVGPVSP MGLALKKRPR PLFGNGDSML PAFLPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	281	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	1e-119	G2-like family protein