PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073342.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 628aa MW: 69272.3 Da PI: 7.1679

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	426	463	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + XP_028073342.1 426 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 463 554459******************************88 PP
2	BELL	102.2	3.7e-33	297	366	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kk++L+ +l+eV++rYk y++q+qtv++sFe vagl +a+pY++lAlka+S+hFr+Lk+ai++q+ XP_028073342.1 297 GEQRRKKSRLILMLDEVYRRYKYYYQQMQTVVASFESVAGLSNAAPYANLALKAMSKHFRSLKNAITDQL 366 57899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MAEEGFEPYH VPQQSRRDKL RVLAQNNLQG CAGLLPLYDP SHITSADLLT CATLHHQHHH 60 HNNSLLSRSS SPNQTSSNCD VIKEEGVNLM GYVSSSTSQH LYMDPQSSIH LNPSSIQDIN 120 NNPFLFSPQN FRVFDQSFNG GDVVVYKPEA NNINNPNGQG LSLSLSSHHT HQTSLPLELN 180 LQRYESSIFN NKVAGSGYVV PATVGGGGGA GGGGGSASND LSRSSVPLGP FTGYASILKG 240 SRFLKPAQQL LEELCDVGRG IYAEKITAVE SSLMDPPMEN LGGCGIADES PSGGDGGEQR 300 RKKSRLILML DEVYRRYKYY YQQMQTVVAS FESVAGLSNA APYANLALKA MSKHFRSLKN 360 AITDQLRFTG KAQNYRKDET LSFGNSEILY SHRPVHNSGF LEHQPVWRPQ RGLPERAVTV 420 LRAWLFEHFL HPYPTDTDKL MLAKQTGLSR SQVSNWFINA RVRLWKPMVE EIHMLETRQG 480 QKTLQREEQQ NTDGPNDHLP TATSLASENP STSTKRAQDL PSKRTRNEFP DIYMGTEEPV 540 NLSYENLSRH QQMGVGVNTA SGSGGVSLTL GLHQNNGIGL SEPFPVNAAR RFGLEANTEG 600 YVMGSFEAQN RQFGRDMIGG QLLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MAEEGFEPYH VPQQSRRDKL RVLAQNNLQG CAGLLPLYDP SHITSADLLT CATLHHQHHH  60
HNNSLLSRSS SPNQTSSNCD VIKEEGVNLM GYVSSSTSQH LYMDPQSSIH LNPSSIQDIN  120
NNPFLFSPQN FRVFDQSFNG GDVVVYKPEA NNINNPNGQG LSLSLSSHHT HQTSLPLELN  180
LQRYESSIFN NKVAGSGYVV PATVGGGGGA GGGGGSASND LSRSSVPLGP FTGYASILKG  240
SRFLKPAQQL LEELCDVGRG IYAEKITAVE SSLMDPPMEN LGGCGIADES PSGGDGGEQR  300
RKKSRLILML DEVYRRYKYY YQQMQTVVAS FESVAGLSNA APYANLALKA MSKHFRSLKN  360
AITDQLRFTG KAQNYRKDET LSFGNSEILY SHRPVHNSGF LEHQPVWRPQ RGLPERAVTV  420
LRAWLFEHFL HPYPTDTDKL MLAKQTGLSR SQVSNWFINA RVRLWKPMVE EIHMLETRQG  480
QKTLQREEQQ NTDGPNDHLP TATSLASENP STSTKRAQDL PSKRTRNEFP DIYMGTEEPV  540
NLSYENLSRH QQMGVGVNTA SGSGGVSLTL GLHQNNGIGL SEPFPVNAAR RFGLEANTEG  600
YVMGSFEAQN RQFGRDMIGG QLLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-105	TALE family protein