PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073360.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 354aa MW: 40037.1 Da PI: 8.5547

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.6e-32	76	130	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFv+av+q GG++kAtPk+++++m+++gLtl+h+kSHLQkYRl XP_028073360.1 76 KPRLKWTPELHRRFVDAVTQFGGADKATPKALMRMMSIPGLTLYHLKSHLQKYRL 130 79****************************************************8 PP
2	Myb_DNA-binding	60.9	2.7e-19	78	129	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++ ++vdav+q+Gg t+k+ +r+m g+tl+++ks++qky+ XP_028073360.1 78 RLKWTPELHRRFVDAVTQFGGAdkaTPKALMRMMSiPGLTLYHLKSHLQKYR 129 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MPCQQLPNYK EKLQLPHTQT RAQRIKKKIH YYSICHFILS IVFAKKENIK NRTMGHQQQQ 60 HVQNQDTSLV LSSDAKPRLK WTPELHRRFV DAVTQFGGAD KATPKALMRM MSIPGLTLYH 120 LKSHLQKYRL GKSQHSETYQ EINQQDYEAD PGRDVDFNGE AGDETPNQIN DLQIAQALQV 180 QMEVQRKLHE QIEVQRHLQL RIEAQGKYLQ SVLKKAQETL AEYNASSVGV EIAKAELSQL 240 VSMVDNGCQS SLSSVLTDIG GPSPKDAEKN HLVEGTTGCS SSESSGRMQE KCNDNSVVLS 300 LMDLSPRPNQ SSGRKRRGST ISDGNCDEKQ SKSDEKLNKF GLKDRFDLNI QYLD

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MPCQQLPNYK EKLQLPHTQT RAQRIKKKIH YYSICHFILS IVFAKKENIK NRTMGHQQQQ  60
HVQNQDTSLV LSSDAKPRLK WTPELHRRFV DAVTQFGGAD KATPKALMRM MSIPGLTLYH  120
LKSHLQKYRL GKSQHSETYQ EINQQDYEAD PGRDVDFNGE AGDETPNQIN DLQIAQALQV  180
QMEVQRKLHE QIEVQRHLQL RIEAQGKYLQ SVLKKAQETL AEYNASSVGV EIAKAELSQL  240
VSMVDNGCQS SLSSVLTDIG GPSPKDAEKN HLVEGTTGCS SSESSGRMQE KCNDNSVVLS  300
LMDLSPRPNQ SSGRKRRGST ISDGNCDEKQ SKSDEKLNKF GLKDRFDLNI QYLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.2	5e-72	G2-like family protein