PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073480.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 223aa MW: 24899.3 Da PI: 8.9564

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	141.5	2.2e-44	45	140	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +e+d+f+Pian++rim++vlP++akis+d ke vq+c+s+fisf+t+ea+++c++e+ kt++++d+l a++ lGfedyvepl+++l++yr +e+e XP_028073480.1 45 SEHDQFMPIANITRIMRRVLPQHAKISDDVKEYVQQCISKFISFITGEANERCHHEQGKTVTAQDILSAMGRLGFEDYVEPLTLFLNHYRGIESE 139 799*****************************************************************************************998 PP NF-YB 97 k 97 + XP_028073480.1 140 H 140 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MGAKDIFTRC YCLIFSNLIS ALIATKRHRR AKNSNREQSL PVFVSEHDQF MPIANITRIM 60 RRVLPQHAKI SDDVKEYVQQ CISKFISFIT GEANERCHHE QGKTVTAQDI LSAMGRLGFE 120 DYVEPLTLFL NHYRGIESEH TLMRGEPFVK RTTGDFVQPG PGNYGPQGFP VTQTQAQGLL 180 DAHAAMMKKG MNSYYGDSRG GGSSSSSQAA LPSFDPCGQF KRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	1e-50	NF-YB family protein