PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073489.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 254aa    MW: 28912.2 Da    PI: 7.6248
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.41.9e-121942484495
             NAM  44 PwdLpk...kvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     P  L+       +  eekewyfF++rd+ky++gkr+nra+ +gyWk   ++ ++ s+
  XP_028073489.1 194 PLALKVlenY--KpyEEKEWYFFTPRDRKYKNGKRPNRAAGDGYWKDFDSKLRIESN 248
                     6666522222..134789****************************99988888774 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDSGMEEMIK LVGLGLDDAR VVGIWGMGGI GKTTLASAIY AHISFQFEGC SFIENVREVL  60
ENGGLKTLHE QLISEILMEK DMKVGNIGSA LSTIRNGICR KKVHIVLDEV DESTEFEKLV  120
GELNWFGFGS RIIITTRNQH TLIRYGIKHI YKVEELGEDE AIELFKSKAF KKHQQMGGYG  180
ELVHCAVKYA KGFPLALKVL ENYKPYEEKE WYFFTPRDRK YKNGKRPNRA AGDGYWKDFD  240
SKLRIESNSS NTQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.31e-30WRKY family protein