PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073996.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 169aa    MW: 19479.3 Da    PI: 9.1737
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.84.1e-2427116190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+rk++ +k+k +++ ++r +vC+keg+r+ +k++   ++++rae+rtgC+a+l vk+++ + k++vt++ ++ nH+l+
  XP_028073996.1  27 DFYNTYGGRMGFSIRKDYYTKNKFTNQLICRLLVCNKEGFRKVDKRD-PLAKNHRAENRTGCEAQLYVKLDEgTRKFVVTDFTEKRNHDLV 116
                     6*******************************************999.9999********************9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MDMKPENDCA WKPKHGMTVD FEQSVYDFYN TYGGRMGFSI RKDYYTKNKF TNQLICRLLV  60
CNKEGFRKVD KRDPLAKNHR AENRTGCEAQ LYVKLDEGTR KFVVTDFTEK RNHDLVSPEC  120
AHMLPSQRKI STTQAIELDL AAQYGLRLGQ SFELMGRKLV GGNVLGLQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.26e-19FAR1 family protein