PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074026.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 301aa MW: 34362.6 Da PI: 6.6692

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.3	1.4e-24	64	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ ++GFs+rk++ +k+k+++eit+rtfvC+keg+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028074026.1 64 DFYNTYGGKLGFSIRKAYANKNKHTKEITSRTFVCYKEGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 154 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MAEMEEQRDS EQMIVGDGES GGDAMAGMRH CGDNEVMEES NIVDDCGWKP KVGMLFDSEQ 60 AAYDFYNTYG GKLGFSIRKA YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV 120 RCGCGARFSI KLDRISGKYI ACDFVEHHNH DLVPEDCIHM LPSQRKISTT QAIEVELASQ 180 SGIPLRSVYE LFGRESDGRA SFGFTKLDQK NYLRSKRQKD LKYGKAGSVL HYFRKKTVEN 240 SSFFFYAVQL DCDEQISNIF WADAQMIMDY ALFGDVVTFD TTYKLNNEHR PFGSFVGFNH 300 H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-57	FAR1 family protein