PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074051.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 595aa MW: 66032.5 Da PI: 6.3633

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.4e-12	426	472	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +L+ XP_028074051.1 426 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELE 472 799*********************66......*************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MKLEVGMGGL VWSDDDRAMV AAVLGTKAFD YLMSSSVSAE CSLMAVGSGE NLQNKLSNLV 60 DRPSAYFSWN YAIFWQISQS KDGDLVLGWG DGSCREPKEG EESEVTRFLN FRLEDETQQT 120 MRKRVLQKLH TLFGGSDEDS YAFGLDRVTD IEMFFLASMY FSFPRGEGGP GKCFVSGKHV 180 WLSDVLKLSS EYCVRSFLAK SAGIRTIVLI PTEFGVVELG SVRSIPESLE LVLSVRSSFS 240 STVKANPMAV VPVPVVSEKK DEHAHFSNLG VGERPNGIAK IFGQNLNSGR SQTREKLAFR 300 KGEERPQEAY TNGNRLPFPN TQSGLHGPGW TQFHSVKPAN NLHELVNAVR DEFQLNHYQP 360 QKAARMQIDF TGGTTSRPVI PGPVSVESEH SDIEASVKDE LAVLADEKKP RKRGRKPANG 420 REEPLNHVEA ERQRREKLNQ RFYALRAVVP NISKMDKASL LGDAIAYITE LEKKLKVMES 480 ETENLGKPSR ESLDLEANPN SENQNQVHNI EIQTTHDEVV VRVSCPLDTH PVSRVIQAFE 540 EAKITVVESK VATGNHTVFH TFVIKSQGSE QITMESLVAA FSRESNNLQP LSSVG

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MKLEVGMGGL VWSDDDRAMV AAVLGTKAFD YLMSSSVSAE CSLMAVGSGE NLQNKLSNLV  60
DRPSAYFSWN YAIFWQISQS KDGDLVLGWG DGSCREPKEG EESEVTRFLN FRLEDETQQT  120
MRKRVLQKLH TLFGGSDEDS YAFGLDRVTD IEMFFLASMY FSFPRGEGGP GKCFVSGKHV  180
WLSDVLKLSS EYCVRSFLAK SAGIRTIVLI PTEFGVVELG SVRSIPESLE LVLSVRSSFS  240
STVKANPMAV VPVPVVSEKK DEHAHFSNLG VGERPNGIAK IFGQNLNSGR SQTREKLAFR  300
KGEERPQEAY TNGNRLPFPN TQSGLHGPGW TQFHSVKPAN NLHELVNAVR DEFQLNHYQP  360
QKAARMQIDF TGGTTSRPVI PGPVSVESEH SDIEASVKDE LAVLADEKKP RKRGRKPANG  420
REEPLNHVEA ERQRREKLNQ RFYALRAVVP NISKMDKASL LGDAIAYITE LEKKLKVMES  480
ETENLGKPSR ESLDLEANPN SENQNQVHNI EIQTTHDEVV VRVSCPLDTH PVSRVIQAFE  540
EAKITVVESK VATGNHTVFH TFVIKSQGSE QITMESLVAA FSRESNNLQP LSSVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	408	416	KKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein