PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074066.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 213aa    MW: 24259 Da    PI: 5.8862
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.27e-12118163247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      g+WT+eE+  ++ + +++G+g+W++I+r+  ++R + q+ s+ qky
   XP_028074066.1 118 GPWTKEEHGNFLIGLARFGKGDWRSISRHCVQTRNPTQVASHAQKY 163
                      89***************************999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MEIPHLVDNL DELSWFFISS PPPPMHTEWT FEENKLFENT LAEFDLNSMD LFEKIASRIL  60
GKTVDQIKEH YESLVEDVEM IESGFVPLPD YEIIKNDGNG STLTVQNNFN YQQRRKGGPW  120
TKEEHGNFLI GLARFGKGDW RSISRHCVQT RNPTQVASHA QKYYIRLQKS NVAQQNANST  180
MALSSRSSKP GDRDTSTSGQ SSTGIPFHPY QSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-43MYB family protein