PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074170.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 237aa    MW: 26806.9 Da    PI: 7.7058
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002583105123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C k F ++  L  H++ H
  XP_028074170.1  83 FECQYCFKEFANSQALGGHQNAH 105
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEKDVSNLLS PTWDGDNESS SSKSCGEKKL RLFGFELDPY KINGEISMKG SAEGPDLESV  60
NSSTIVSHDQ KSRKGDAAEE KKFECQYCFK EFANSQALGG HQNAHKKERL KKKRLQLQAR  120
KASINCYLQP YQNSHGFAYH GSSAPWFYDP SCYAPDFCHY EEPQISFCRL KQGSNLYKSQ  180
VSNRYALPGQ MVPFQQDTCV FTLTQTDRSG ESQPIIFNPS LFPDSKQHCK TLDLQLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.11e-10C2H2 family protein