PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074240.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 795aa MW: 91794.8 Da PI: 8.4489

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.8	2.7e-11	48	133	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY +YAk++ F v ++++ ++ge+ C++ kr+++++ + +++ ++ ++Ckak + +++kdg++++t+++l+H+H+l XP_028074240.1 48 SFYAKYAKHLRFVVAYRTQNIG-QDGEVNYFGVECTRACKRTKRSEV--HPLEPTLSSFIECKAKARATLQKDGRFKLTTVVLQHTHDL 133 5**********999887776.8999***********99877..9999********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
MDIDSTNPSL NGSEEVEEAE NNSSLNKIGE VQEPEKGMCF NSKQGVYSFY AKYAKHLRFV 60 VAYRTQNIGQ DGEVNYFGVE CTRACKRTKR SEVHPLEPTL SSFIECKAKA RATLQKDGRF 120 KLTTVVLQHT HDLILSDSRH FAMNKRILTP TKRRIEINDE PWIRVARNFH SIVIEAGGYE 180 ALSFDEQDAR NHIQSMRRLR LGVGDAESVA LYFHRMQQQN SNFYYAIDLD EDGRMRNLFW 240 ADARSMATYK AFGDVVSFDT TYLTNKYDMP FAQFVGVNHH GQSILLGCGL LSNENTETFL 300 WLFREWLSCM SDVPPKAIII DQCRTMQNAI EVLFPEARHR WCLWHIMKKI PEKLRGYAQY 360 ESIKLALQNA VYDCFTKHEF DEEWQAMIGK FNLDDNDWLG VLYSERHGWI PVYVKDVFWA 420 GMPTTQRSES MNAFFDGYVN SKTTLKQFFE QYDHALRSKV EKEMKADLKS RKKLYDCLTV 480 YEFEKQFRVA YTNAKFKEVQ VELKRLLYCR ANLVKEEGAM CTYHVKEAVL VGEKMKTVEF 540 VVYFNATECE LHYKYIVSRW KKDIERGYTS IPTTYTKAGA VLNAKLHDKY HKMLDEIIEI 600 AGNNDGKHEV LYLGLIEIKD RVRKDQSGSA SHAPPSTSNV PHSHTSLRSP SARSTTKASM 660 SHNMLSPMVA RRRGRPCTKR KVSKVDAIVN RLKRKSKKPP KAQGHTVRQC QPRKLNFPGT 720 DDMQYNTCHD PMGESDCWRR MVNLIANADK PIVMVQIKSM NVECSWLNVE SIAESVFECM 780 NAPDCLNAES ICEYA

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

MDIDSTNPSL NGSEEVEEAE NNSSLNKIGE VQEPEKGMCF NSKQGVYSFY AKYAKHLRFV  60
VAYRTQNIGQ DGEVNYFGVE CTRACKRTKR SEVHPLEPTL SSFIECKAKA RATLQKDGRF  120
KLTTVVLQHT HDLILSDSRH FAMNKRILTP TKRRIEINDE PWIRVARNFH SIVIEAGGYE  180
ALSFDEQDAR NHIQSMRRLR LGVGDAESVA LYFHRMQQQN SNFYYAIDLD EDGRMRNLFW  240
ADARSMATYK AFGDVVSFDT TYLTNKYDMP FAQFVGVNHH GQSILLGCGL LSNENTETFL  300
WLFREWLSCM SDVPPKAIII DQCRTMQNAI EVLFPEARHR WCLWHIMKKI PEKLRGYAQY  360
ESIKLALQNA VYDCFTKHEF DEEWQAMIGK FNLDDNDWLG VLYSERHGWI PVYVKDVFWA  420
GMPTTQRSES MNAFFDGYVN SKTTLKQFFE QYDHALRSKV EKEMKADLKS RKKLYDCLTV  480
YEFEKQFRVA YTNAKFKEVQ VELKRLLYCR ANLVKEEGAM CTYHVKEAVL VGEKMKTVEF  540
VVYFNATECE LHYKYIVSRW KKDIERGYTS IPTTYTKAGA VLNAKLHDKY HKMLDEIIEI  600
AGNNDGKHEV LYLGLIEIKD RVRKDQSGSA SHAPPSTSNV PHSHTSLRSP SARSTTKASM  660
SHNMLSPMVA RRRGRPCTKR KVSKVDAIVN RLKRKSKKPP KAQGHTVRQC QPRKLNFPGT  720
DDMQYNTCHD PMGESDCWRR MVNLIANADK PIVMVQIKSM NVECSWLNVE SIAESVFECM  780
NAPDCLNAES ICEYA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	675	685	RPCTKRKVSKV
2	679	698	KRKVSKVDAIVNRLKRKSKK
3	680	698	RKVSKVDAIVNRLKRKSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-105	FAR1 family protein