PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074241.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 367aa MW: 42748.9 Da PI: 8.6637

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.2	6.4e-24	24	112	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ +GF +r+++++ks+++g +++r+fvC keg++e++k ++++ etrt+C+ + v++++ +kw v++++ +HnH+l XP_028074241.1 24 QFYNEYGRIMGFGIRRDYHSKSRKDGAMINRKFVCCKEGEKEKDKWY-MIVNHPKHETRTKCNVFMYVSLDRdLSKWIVKNFDDDHNHHL 112 6****************************************9999.99999**************9899***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MRELTKDKTP CLSMEFHSEE AAYQFYNEYG RIMGFGIRRD YHSKSRKDGA MINRKFVCCK 60 EGEKEKDKWY MIVNHPKHET RTKCNVFMYV SLDRDLSKWI VKNFDDDHNH HLHLPQCTHL 120 IPSQRKLCQA QALNVDIAND TGIFLKASRD LISALAGGKE NLGFTAEDQK RYLRGKRQQN 180 LQYGEAGSLL RYFQQQAAEN PYFYYAIQLD VNEMITNIFW TDHKMITDYE LFGDAVSFDT 240 TFRTNKEYRP LVLFTGFNHF RKTMIFGASL LYDETTASFE WLFETFLHAM SGKKSTSFFT 300 DQDQAITKAI SKVMPKVFHG LCTFHPMQNA LKHLGYLYKS GSKFGSDFKT CILDTRMNTS 360 SLMLGIL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MRELTKDKTP CLSMEFHSEE AAYQFYNEYG RIMGFGIRRD YHSKSRKDGA MINRKFVCCK  60
EGEKEKDKWY MIVNHPKHET RTKCNVFMYV SLDRDLSKWI VKNFDDDHNH HLHLPQCTHL  120
IPSQRKLCQA QALNVDIAND TGIFLKASRD LISALAGGKE NLGFTAEDQK RYLRGKRQQN  180
LQYGEAGSLL RYFQQQAAEN PYFYYAIQLD VNEMITNIFW TDHKMITDYE LFGDAVSFDT  240
TFRTNKEYRP LVLFTGFNHF RKTMIFGASL LYDETTASFE WLFETFLHAM SGKKSTSFFT  300
DQDQAITKAI SKVMPKVFHG LCTFHPMQNA LKHLGYLYKS GSKFGSDFKT CILDTRMNTS  360
SLMLGIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-70	FAR1 family protein