PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074368.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 527aa MW: 60261.7 Da PI: 7.5878

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.8	1.7e-08	37	104	2	72
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 fY +YAk+vGF + ++++ ++ + + Cs+ g+r+++++ + ++ +t++gC+a+ +++ ++ XP_028074368.1 37 FYGKYAKHVGFAIAHRAQHFG-DDVQLLNFAIECSRAGQRKKTSEV--NPLKPCLSTKIGCTARRRLEIND 104 9**********99988877.7788**********998876..9999*********98777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MEVDSNVGEN PLINEGEHVE EPKKGMCFSS REEVYTFYGK YAKHVGFAIA HRAQHFGDDV 60 QLLNFAIECS RAGQRKKTSE VNPLKPCLST KIGCTARRRL EINDQAGIGV SRNFYSMVIE 120 AGGYKSLTFD EQDARNYIER ARSEDTNTFV WLFKSWLSCM SNHSPKAIIT DQCRAMQNDI 180 EIVFPRARHR WYLWHIMKKI PKKLKGYAQY EAIKLAMQNA VYDCLTRVEF ESKWEEMLAT 240 FNLYDNEWLG VLYDERNRWV EKEKKVDFKS RHKLFDCLTI YGFEKQFQQT YTNAKFKEVQ 300 GELKRLVYCQ VVIVKEEGSI STYNVQEAMV VSEKMKHVDL VVYFNSTECE VQCICRLFEF 360 RGIMCAHSLA VLVRRCINEV ASKYILPWWR KDVDSEYACI KTTYTGFGND FNASTYERMN 420 KKLIAIVQLV GNSEGKTRII DLGLDEIKER VMKEESGDGS NLPCSTRSPI HIGSTQGGTS 480 RKVAHGIGGT SLTPSDFISG TQGSLMSAPT QIYGSASGSL DITDLFD

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MEVDSNVGEN PLINEGEHVE EPKKGMCFSS REEVYTFYGK YAKHVGFAIA HRAQHFGDDV  60
QLLNFAIECS RAGQRKKTSE VNPLKPCLST KIGCTARRRL EINDQAGIGV SRNFYSMVIE  120
AGGYKSLTFD EQDARNYIER ARSEDTNTFV WLFKSWLSCM SNHSPKAIIT DQCRAMQNDI  180
EIVFPRARHR WYLWHIMKKI PKKLKGYAQY EAIKLAMQNA VYDCLTRVEF ESKWEEMLAT  240
FNLYDNEWLG VLYDERNRWV EKEKKVDFKS RHKLFDCLTI YGFEKQFQQT YTNAKFKEVQ  300
GELKRLVYCQ VVIVKEEGSI STYNVQEAMV VSEKMKHVDL VVYFNSTECE VQCICRLFEF  360
RGIMCAHSLA VLVRRCINEV ASKYILPWWR KDVDSEYACI KTTYTGFGND FNASTYERMN  420
KKLIAIVQLV GNSEGKTRII DLGLDEIKER VMKEESGDGS NLPCSTRSPI HIGSTQGGTS  480
RKVAHGIGGT SLTPSDFISG TQGSLMSAPT QIYGSASGSL DITDLFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	5e-41	FAR1 family protein